Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ssmem1Q9D9Y8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ssmem1Q9D9Y8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ssmem1Q9D9Y8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ssmem1Q9D9Y8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ssmem1Q9D9Y8 Gm15372-201ENSMUST00000120729 834 ntBASIC13.96□□□□□ -0.17
Ssmem1Q9D9Y8 Gm12895-201ENSMUST00000122214 226 ntBASIC13.96□□□□□ -0.17
Ssmem1Q9D9Y8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.96□□□□□ -0.17
Ssmem1Q9D9Y8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ssmem1Q9D9Y8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ssmem1Q9D9Y8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ssmem1Q9D9Y8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ssmem1Q9D9Y8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ssmem1Q9D9Y8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ssmem1Q9D9Y8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ssmem1Q9D9Y8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ssmem1Q9D9Y8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ssmem1Q9D9Y8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Ssmem1Q9D9Y8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ssmem1Q9D9Y8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ssmem1Q9D9Y8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ssmem1Q9D9Y8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ssmem1Q9D9Y8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ssmem1Q9D9Y8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ssmem1Q9D9Y8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ssmem1Q9D9Y8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ssmem1Q9D9Y8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ssmem1Q9D9Y8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ssmem1Q9D9Y8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ssmem1Q9D9Y8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ssmem1Q9D9Y8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Ssmem1Q9D9Y8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ssmem1Q9D9Y8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.93□□□□□ -0.18
Ssmem1Q9D9Y8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.93□□□□□ -0.18
Ssmem1Q9D9Y8 Gm17971-201ENSMUST00000190239 806 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms