Protein–RNA interactions for Protein: Q9D8T0

Fam3a, Protein FAM3A, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam3aQ9D8T0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Fam3aQ9D8T0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Fam3aQ9D8T0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fam3aQ9D8T0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fam3aQ9D8T0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fam3aQ9D8T0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Fam3aQ9D8T0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Fam3aQ9D8T0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.65■□□□□ 0.26
Fam3aQ9D8T0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Fam3aQ9D8T0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fam3aQ9D8T0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fam3aQ9D8T0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fam3aQ9D8T0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fam3aQ9D8T0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.65■□□□□ 0.26
Fam3aQ9D8T0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.65■□□□□ 0.26
Fam3aQ9D8T0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Fam3aQ9D8T0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Fam3aQ9D8T0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Gm13312-201ENSMUST00000119631 718 ntBASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fam3aQ9D8T0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.63■□□□□ 0.25
Fam3aQ9D8T0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.62■□□□□ 0.25
Fam3aQ9D8T0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fam3aQ9D8T0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms