Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC21.23■□□□□ 0.99
U2af1Q9D883 Gm45244-201ENSMUST00000211328 2200 ntBASIC21.23■□□□□ 0.99
U2af1Q9D883 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
U2af1Q9D883 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC21.23■□□□□ 0.99
U2af1Q9D883 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
U2af1Q9D883 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC21.23■□□□□ 0.99
U2af1Q9D883 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
U2af1Q9D883 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
U2af1Q9D883 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
U2af1Q9D883 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
U2af1Q9D883 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
U2af1Q9D883 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
U2af1Q9D883 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
U2af1Q9D883 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
U2af1Q9D883 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
U2af1Q9D883 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC21.22■□□□□ 0.99
U2af1Q9D883 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
U2af1Q9D883 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
U2af1Q9D883 Gm8349-201ENSMUST00000182720 1003 ntBASIC21.22■□□□□ 0.99
U2af1Q9D883 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
U2af1Q9D883 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
U2af1Q9D883 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
U2af1Q9D883 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
U2af1Q9D883 Haglr-201ENSMUST00000100000 2085 ntBASIC21.22■□□□□ 0.99
U2af1Q9D883 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
U2af1Q9D883 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
U2af1Q9D883 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2af1Q9D883 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2af1Q9D883 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2af1Q9D883 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2af1Q9D883 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2af1Q9D883 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2af1Q9D883 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2af1Q9D883 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
U2af1Q9D883 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
U2af1Q9D883 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
U2af1Q9D883 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
U2af1Q9D883 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2af1Q9D883 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC21.21■□□□□ 0.99
U2af1Q9D883 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC21.21■□□□□ 0.99
U2af1Q9D883 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC21.21■□□□□ 0.99
U2af1Q9D883 Gm7461-201ENSMUST00000058918 827 ntBASIC21.21■□□□□ 0.99
U2af1Q9D883 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2af1Q9D883 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2af1Q9D883 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
U2af1Q9D883 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
U2af1Q9D883 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2af1Q9D883 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2af1Q9D883 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
U2af1Q9D883 Gm26917-202ENSMUST00000192833 3329 ntBASIC21.21■□□□□ 0.99
U2af1Q9D883 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
U2af1Q9D883 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
U2af1Q9D883 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
U2af1Q9D883 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
U2af1Q9D883 AC115863.1-201ENSMUST00000214815 1813 ntBASIC21.2■□□□□ 0.98
U2af1Q9D883 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
U2af1Q9D883 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
U2af1Q9D883 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
U2af1Q9D883 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
U2af1Q9D883 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC21.2■□□□□ 0.98
U2af1Q9D883 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
U2af1Q9D883 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC21.2■□□□□ 0.98
U2af1Q9D883 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
U2af1Q9D883 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
U2af1Q9D883 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
U2af1Q9D883 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
U2af1Q9D883 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
U2af1Q9D883 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
U2af1Q9D883 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
U2af1Q9D883 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
U2af1Q9D883 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC21.19■□□□□ 0.98
U2af1Q9D883 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
U2af1Q9D883 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
U2af1Q9D883 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC21.19■□□□□ 0.98
U2af1Q9D883 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC21.19■□□□□ 0.98
U2af1Q9D883 AC159301.1-201ENSMUST00000225130 1182 ntBASIC21.19■□□□□ 0.98
U2af1Q9D883 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
U2af1Q9D883 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
U2af1Q9D883 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
U2af1Q9D883 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
U2af1Q9D883 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
U2af1Q9D883 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
U2af1Q9D883 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC21.19■□□□□ 0.98
U2af1Q9D883 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2af1Q9D883 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2af1Q9D883 Mir6404-201ENSMUST00000183699 94 ntBASIC21.18■□□□□ 0.98
U2af1Q9D883 Gm7506-201ENSMUST00000207758 815 ntBASIC21.18■□□□□ 0.98
U2af1Q9D883 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
U2af1Q9D883 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
U2af1Q9D883 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2af1Q9D883 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2af1Q9D883 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
U2af1Q9D883 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
U2af1Q9D883 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2af1Q9D883 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
U2af1Q9D883 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1Q9D883 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1Q9D883 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1Q9D883 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1Q9D883 Gm5864-201ENSMUST00000202263 970 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms