Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf225Q9D7D1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf225Q9D7D1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Gm6623-201ENSMUST00000173570 544 ntBASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rnf225Q9D7D1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rnf225Q9D7D1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf225Q9D7D1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf225Q9D7D1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rnf225Q9D7D1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf225Q9D7D1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf225Q9D7D1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17■□□□□ 0.31
Rnf225Q9D7D1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf225Q9D7D1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf225Q9D7D1 Gm23634-201ENSMUST00000175071 91 ntBASIC17■□□□□ 0.31
Rnf225Q9D7D1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17■□□□□ 0.31
Rnf225Q9D7D1 Gm28925-201ENSMUST00000188586 168 ntBASIC17■□□□□ 0.31
Rnf225Q9D7D1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rnf225Q9D7D1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf225Q9D7D1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf225Q9D7D1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf225Q9D7D1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf225Q9D7D1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf225Q9D7D1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf225Q9D7D1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Rnf225Q9D7D1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf225Q9D7D1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf225Q9D7D1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf225Q9D7D1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Rnf225Q9D7D1 Gm44729-201ENSMUST00000206759 2052 ntBASIC17■□□□□ 0.31
Rnf225Q9D7D1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rnf225Q9D7D1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf225Q9D7D1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 Gm10052-201ENSMUST00000168019 960 ntBASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 Gm29518-201ENSMUST00000190858 372 ntBASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 Gm7729-201ENSMUST00000050143 801 ntBASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf225Q9D7D1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Rnf225Q9D7D1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.98■□□□□ 0.31
Rnf225Q9D7D1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf225Q9D7D1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf225Q9D7D1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rnf225Q9D7D1 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf225Q9D7D1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf225Q9D7D1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf225Q9D7D1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf225Q9D7D1 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf225Q9D7D1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf225Q9D7D1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
Rnf225Q9D7D1 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Rnf225Q9D7D1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rnf225Q9D7D1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf225Q9D7D1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf225Q9D7D1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf225Q9D7D1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms