Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1bQ9D0N7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1bQ9D0N7 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1bQ9D0N7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1bQ9D0N7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1bQ9D0N7 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1bQ9D0N7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1bQ9D0N7 Gm7638-201ENSMUST00000121348 967 ntBASIC15.25■□□□□ 0.03
Chaf1bQ9D0N7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1bQ9D0N7 Gm20049-201ENSMUST00000219950 730 ntBASIC15.25■□□□□ 0.03
Chaf1bQ9D0N7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1bQ9D0N7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1bQ9D0N7 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1bQ9D0N7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Chaf1bQ9D0N7 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1bQ9D0N7 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.25■□□□□ 0.03
Chaf1bQ9D0N7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1bQ9D0N7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Chaf1bQ9D0N7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1bQ9D0N7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1bQ9D0N7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1bQ9D0N7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1bQ9D0N7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1bQ9D0N7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1bQ9D0N7 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.24■□□□□ 0.03
Chaf1bQ9D0N7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1bQ9D0N7 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1bQ9D0N7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1bQ9D0N7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1bQ9D0N7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Chaf1bQ9D0N7 Gm15039-201ENSMUST00000118914 875 ntBASIC15.24■□□□□ 0.03
Chaf1bQ9D0N7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1bQ9D0N7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1bQ9D0N7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Chaf1bQ9D0N7 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1bQ9D0N7 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1bQ9D0N7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1bQ9D0N7 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1bQ9D0N7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.24■□□□□ 0.03
Chaf1bQ9D0N7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1bQ9D0N7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1bQ9D0N7 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chaf1bQ9D0N7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms