Protein–RNA interactions for Protein: Q9CZN4

Shisa9, Protein shisa-9, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa9Q9CZN4 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Gm10819-201ENSMUST00000099988 561 ntBASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa9Q9CZN4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Gm18669-201ENSMUST00000216049 778 ntBASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa9Q9CZN4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Gm9103-201ENSMUST00000119371 405 ntBASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Gm13312-201ENSMUST00000119631 718 ntBASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa9Q9CZN4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Shisa9Q9CZN4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa9Q9CZN4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Shisa9Q9CZN4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms