Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.67■□□□□ 0.26
Snf8Q9CZ28 Gm27463-201ENSMUST00000183569 57 ntBASIC16.67■□□□□ 0.26
Snf8Q9CZ28 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.67■□□□□ 0.26
Snf8Q9CZ28 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snf8Q9CZ28 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snf8Q9CZ28 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Snf8Q9CZ28 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.67■□□□□ 0.26
Snf8Q9CZ28 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.67■□□□□ 0.26
Snf8Q9CZ28 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snf8Q9CZ28 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.67■□□□□ 0.26
Snf8Q9CZ28 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snf8Q9CZ28 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Snf8Q9CZ28 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Snf8Q9CZ28 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snf8Q9CZ28 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Snf8Q9CZ28 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snf8Q9CZ28 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snf8Q9CZ28 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Snf8Q9CZ28 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snf8Q9CZ28 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snf8Q9CZ28 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snf8Q9CZ28 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snf8Q9CZ28 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snf8Q9CZ28 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snf8Q9CZ28 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.66■□□□□ 0.26
Snf8Q9CZ28 Gm715-201ENSMUST00000117865 831 ntBASIC16.66■□□□□ 0.26
Snf8Q9CZ28 Gm11539-201ENSMUST00000119837 557 ntBASIC16.66■□□□□ 0.26
Snf8Q9CZ28 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Snf8Q9CZ28 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Snf8Q9CZ28 Gm36967-201ENSMUST00000193814 266 ntBASIC16.66■□□□□ 0.26
Snf8Q9CZ28 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.66■□□□□ 0.26
Snf8Q9CZ28 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snf8Q9CZ28 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Snf8Q9CZ28 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snf8Q9CZ28 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Snf8Q9CZ28 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snf8Q9CZ28 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Snf8Q9CZ28 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snf8Q9CZ28 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.65■□□□□ 0.26
Snf8Q9CZ28 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snf8Q9CZ28 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Snf8Q9CZ28 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Snf8Q9CZ28 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snf8Q9CZ28 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snf8Q9CZ28 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snf8Q9CZ28 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snf8Q9CZ28 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snf8Q9CZ28 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snf8Q9CZ28 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snf8Q9CZ28 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms