Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1lQ9CXF7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1lQ9CXF7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1lQ9CXF7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1lQ9CXF7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Chd1lQ9CXF7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Chd1lQ9CXF7 Gm37736-201ENSMUST00000193564 2802 ntBASIC18.32■□□□□ 0.52
Chd1lQ9CXF7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1lQ9CXF7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1lQ9CXF7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1lQ9CXF7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Chd1lQ9CXF7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1lQ9CXF7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Chd1lQ9CXF7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chd1lQ9CXF7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Actl10-202ENSMUST00000226583 1501 ntBASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Gm12085-201ENSMUST00000119263 940 ntBASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Chd1lQ9CXF7 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1lQ9CXF7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd1lQ9CXF7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms