Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retreg3Q9CQV4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retreg3Q9CQV4 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Retreg3Q9CQV4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retreg3Q9CQV4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retreg3Q9CQV4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.25■□□□□ 0.19
Retreg3Q9CQV4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retreg3Q9CQV4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Retreg3Q9CQV4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retreg3Q9CQV4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retreg3Q9CQV4 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retreg3Q9CQV4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retreg3Q9CQV4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Retreg3Q9CQV4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retreg3Q9CQV4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retreg3Q9CQV4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retreg3Q9CQV4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retreg3Q9CQV4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.25■□□□□ 0.19
Retreg3Q9CQV4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retreg3Q9CQV4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retreg3Q9CQV4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Mir3081-201ENSMUST00000175305 84 ntBASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Gm44771-201ENSMUST00000206975 626 ntBASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retreg3Q9CQV4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 AC154849.3-201ENSMUST00000223733 1660 ntBASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retreg3Q9CQV4 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.22■□□□□ 0.19
Retreg3Q9CQV4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms