Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Gm7862-201ENSMUST00000121461 292 ntBASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Gm13899-201ENSMUST00000121519 1255 ntBASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Gm38273-201ENSMUST00000194987 2382 ntBASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Rab3c-202ENSMUST00000223922 2398 ntBASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Gm2213-201ENSMUST00000197485 688 ntBASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Gm10060-201ENSMUST00000212002 111 ntBASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 AC160338.1-201ENSMUST00000214232 705 ntBASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Gm5867-201ENSMUST00000063197 592 ntBASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sec61bQ9CQS8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Sec61bQ9CQS8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms