Protein–RNA interactions for Protein: Q9CQM1

Type III endosome membrane protein TEMP, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQM1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Q9CQM1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Q9CQM1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Q9CQM1 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Q9CQM1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Q9CQM1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Q9CQM1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Q9CQM1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Q9CQM1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Q9CQM1 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.15■□□□□ 0.02
Q9CQM1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Q9CQM1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Q9CQM1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CQM1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Q9CQM1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CQM1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CQM1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CQM1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CQM1 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CQM1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.14■□□□□ 0.01
Q9CQM1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.14■□□□□ 0.01
Q9CQM1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.14■□□□□ 0.01
Q9CQM1 Gm18489-201ENSMUST00000172565 551 ntBASIC15.14■□□□□ 0.01
Q9CQM1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Q9CQM1 Gm43767-201ENSMUST00000198933 381 ntBASIC15.14■□□□□ 0.01
Q9CQM1 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.14■□□□□ 0.01
Q9CQM1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.14■□□□□ 0.01
Q9CQM1 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.14■□□□□ 0.01
Q9CQM1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Q9CQM1 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CQM1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CQM1 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CQM1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CQM1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CQM1 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.14■□□□□ 0.01
Q9CQM1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CQM1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CQM1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CQM1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CQM1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CQM1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CQM1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q9CQM1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Q9CQM1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CQM1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CQM1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CQM1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CQM1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Q9CQM1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Q9CQM1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.13■□□□□ 0.01
Q9CQM1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.13■□□□□ 0.01
Q9CQM1 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.13■□□□□ 0.01
Q9CQM1 Gm27430-201ENSMUST00000184585 107 ntBASIC15.13■□□□□ 0.01
Q9CQM1 Gm44333-201ENSMUST00000197168 107 ntBASIC15.13■□□□□ 0.01
Q9CQM1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CQM1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.13■□□□□ 0.01
Q9CQM1 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.13■□□□□ 0.01
Q9CQM1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CQM1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.13■□□□□ 0.01
Q9CQM1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CQM1 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Q9CQM1 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CQM1 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.13■□□□□ 0.01
Q9CQM1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Q9CQM1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Q9CQM1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CQM1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CQM1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Q9CQM1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CQM1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CQM1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CQM1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Q9CQM1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CQM1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CQM1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CQM1 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Q9CQM1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CQM1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Q9CQM1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CQM1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.12■□□□□ 0.01
Q9CQM1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Q9CQM1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CQM1 Gm27437-201ENSMUST00000183429 107 ntBASIC15.12■□□□□ 0.01
Q9CQM1 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Q9CQM1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CQM1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CQM1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CQM1 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CQM1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQM1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQM1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQM1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQM1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQM1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.11■□□□□ 0.01
Q9CQM1 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQM1 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
Q9CQM1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Q9CQM1 Gm5866-201ENSMUST00000177881 973 ntBASIC15.11■□□□□ 0.01
Q9CQM1 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CQM1 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms