Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim33Q99PP7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.05■□□□□ 0.16
Trim33Q99PP7 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trim33Q99PP7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim33Q99PP7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.04■□□□□ 0.16
Trim33Q99PP7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim33Q99PP7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trim33Q99PP7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Gm6623-201ENSMUST00000173570 544 ntBASIC16.03■□□□□ 0.16
Trim33Q99PP7 Gm29518-201ENSMUST00000190858 372 ntBASIC16.03■□□□□ 0.16
Trim33Q99PP7 Gm17808-201ENSMUST00000200859 894 ntBASIC16.03■□□□□ 0.16
Trim33Q99PP7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim33Q99PP7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim33Q99PP7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim33Q99PP7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim33Q99PP7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim33Q99PP7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim33Q99PP7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Trim33Q99PP7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim33Q99PP7 Gm11950-201ENSMUST00000121615 838 ntBASIC16.02■□□□□ 0.16
Trim33Q99PP7 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.02■□□□□ 0.16
Trim33Q99PP7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Trim33Q99PP7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim33Q99PP7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim33Q99PP7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms