Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cdh23Q99PF4 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.39■□□□□ 0.21
Cdh23Q99PF4 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh23Q99PF4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cdh23Q99PF4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh23Q99PF4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh23Q99PF4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh23Q99PF4 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cdh23Q99PF4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh23Q99PF4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.39■□□□□ 0.21
Cdh23Q99PF4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh23Q99PF4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.38■□□□□ 0.21
Cdh23Q99PF4 Gm43125-201ENSMUST00000201724 730 ntBASIC16.38■□□□□ 0.21
Cdh23Q99PF4 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh23Q99PF4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh23Q99PF4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh23Q99PF4 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.38■□□□□ 0.21
Cdh23Q99PF4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh23Q99PF4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cdh23Q99PF4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cdh23Q99PF4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh23Q99PF4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh23Q99PF4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh23Q99PF4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh23Q99PF4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Gm20553-201ENSMUST00000204205 844 ntBASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh23Q99PF4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Thap2-203ENSMUST00000218989 527 ntBASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Gm22065-201ENSMUST00000103753 110 ntBASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Gm22066-201ENSMUST00000103761 110 ntBASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Gm24932-201ENSMUST00000103763 110 ntBASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Gm24115-201ENSMUST00000103799 110 ntBASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Gm22190-201ENSMUST00000103827 110 ntBASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Gm22191-201ENSMUST00000103831 110 ntBASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Gm24721-201ENSMUST00000103849 110 ntBASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Gm28018-201ENSMUST00000103869 110 ntBASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Gm26399-201ENSMUST00000103937 110 ntBASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.35■□□□□ 0.21
Cdh23Q99PF4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms