Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.7■□□□□ 0.1
Rnf111Q99ML9 Gm45058-201ENSMUST00000205810 766 ntBASIC15.7■□□□□ 0.1
Rnf111Q99ML9 Gm7213-201ENSMUST00000215977 950 ntBASIC15.7■□□□□ 0.1
Rnf111Q99ML9 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.7■□□□□ 0.1
Rnf111Q99ML9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.7■□□□□ 0.1
Rnf111Q99ML9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf111Q99ML9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf111Q99ML9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf111Q99ML9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf111Q99ML9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf111Q99ML9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Rnf111Q99ML9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Rnf111Q99ML9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf111Q99ML9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rnf111Q99ML9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf111Q99ML9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Rnf111Q99ML9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf111Q99ML9 Asic1-205ENSMUST00000228185 1818 ntBASIC15.67■□□□□ 0.1
Rnf111Q99ML9 Gm13836-201ENSMUST00000121159 501 ntBASIC15.67■□□□□ 0.1
Rnf111Q99ML9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf111Q99ML9 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.67■□□□□ 0.1
Rnf111Q99ML9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.67■□□□□ 0.1
Rnf111Q99ML9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.67■□□□□ 0.1
Rnf111Q99ML9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf111Q99ML9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf111Q99ML9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf111Q99ML9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf111Q99ML9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf111Q99ML9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf111Q99ML9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf111Q99ML9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf111Q99ML9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rnf111Q99ML9 App-207ENSMUST00000227737 2827 ntBASIC15.67■□□□□ 0.1
Rnf111Q99ML9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf111Q99ML9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf111Q99ML9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.66■□□□□ 0.1
Rnf111Q99ML9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf111Q99ML9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf111Q99ML9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf111Q99ML9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rnf111Q99ML9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf111Q99ML9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rnf111Q99ML9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf111Q99ML9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.66■□□□□ 0.1
Rnf111Q99ML9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf111Q99ML9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf111Q99ML9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf111Q99ML9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms