Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tlr3Q99MB1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tlr3Q99MB1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tlr3Q99MB1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tlr3Q99MB1 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.36■□□□□ 0.37
Tlr3Q99MB1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Gm45328-201ENSMUST00000210942 917 ntBASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tlr3Q99MB1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Tlr3Q99MB1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tlr3Q99MB1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Tlr3Q99MB1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tlr3Q99MB1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tlr3Q99MB1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tlr3Q99MB1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tlr3Q99MB1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Tlr3Q99MB1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tlr3Q99MB1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tlr3Q99MB1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tlr3Q99MB1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tlr3Q99MB1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.33■□□□□ 0.36
Tlr3Q99MB1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tlr3Q99MB1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Tlr3Q99MB1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tlr3Q99MB1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tlr3Q99MB1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tlr3Q99MB1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Tlr3Q99MB1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tlr3Q99MB1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms