Protein–RNA interactions for Protein: Q99LM3

Smtnl1, Smoothelin-like protein 1, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smtnl1Q99LM3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.74■□□□□ 0.43
Smtnl1Q99LM3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Smtnl1Q99LM3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smtnl1Q99LM3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smtnl1Q99LM3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.73■□□□□ 0.43
Smtnl1Q99LM3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.73■□□□□ 0.43
Smtnl1Q99LM3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smtnl1Q99LM3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smtnl1Q99LM3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smtnl1Q99LM3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Smtnl1Q99LM3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smtnl1Q99LM3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smtnl1Q99LM3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.73■□□□□ 0.43
Smtnl1Q99LM3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smtnl1Q99LM3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smtnl1Q99LM3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smtnl1Q99LM3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smtnl1Q99LM3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smtnl1Q99LM3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Gm45058-201ENSMUST00000205810 766 ntBASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smtnl1Q99LM3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smtnl1Q99LM3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smtnl1Q99LM3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smtnl1Q99LM3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smtnl1Q99LM3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.71■□□□□ 0.43
Smtnl1Q99LM3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smtnl1Q99LM3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.71■□□□□ 0.43
Smtnl1Q99LM3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.71■□□□□ 0.43
Smtnl1Q99LM3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.71■□□□□ 0.43
Smtnl1Q99LM3 Gm18959-201ENSMUST00000208954 655 ntBASIC17.71■□□□□ 0.43
Smtnl1Q99LM3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smtnl1Q99LM3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Smtnl1Q99LM3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smtnl1Q99LM3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smtnl1Q99LM3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smtnl1Q99LM3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smtnl1Q99LM3 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.71■□□□□ 0.43
Smtnl1Q99LM3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smtnl1Q99LM3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smtnl1Q99LM3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Smtnl1Q99LM3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Smtnl1Q99LM3 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smtnl1Q99LM3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smtnl1Q99LM3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smtnl1Q99LM3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smtnl1Q99LM3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smtnl1Q99LM3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smtnl1Q99LM3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smtnl1Q99LM3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smtnl1Q99LM3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms