Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.9■□□□□ 0.78
RtcbQ99LF4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC19.9■□□□□ 0.78
RtcbQ99LF4 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RtcbQ99LF4 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.9■□□□□ 0.78
RtcbQ99LF4 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RtcbQ99LF4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RtcbQ99LF4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RtcbQ99LF4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RtcbQ99LF4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
RtcbQ99LF4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
RtcbQ99LF4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
RtcbQ99LF4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RtcbQ99LF4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.89■□□□□ 0.77
RtcbQ99LF4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RtcbQ99LF4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RtcbQ99LF4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RtcbQ99LF4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RtcbQ99LF4 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RtcbQ99LF4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
RtcbQ99LF4 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.89■□□□□ 0.77
RtcbQ99LF4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RtcbQ99LF4 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.89■□□□□ 0.77
RtcbQ99LF4 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.89■□□□□ 0.77
RtcbQ99LF4 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RtcbQ99LF4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RtcbQ99LF4 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RtcbQ99LF4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RtcbQ99LF4 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RtcbQ99LF4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RtcbQ99LF4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RtcbQ99LF4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RtcbQ99LF4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RtcbQ99LF4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RtcbQ99LF4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RtcbQ99LF4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Mir1895-201ENSMUST00000122615 79 ntBASIC19.88■□□□□ 0.77
RtcbQ99LF4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RtcbQ99LF4 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Gm17968-201ENSMUST00000194902 784 ntBASIC19.88■□□□□ 0.77
RtcbQ99LF4 Gm7787-201ENSMUST00000216858 688 ntBASIC19.88■□□□□ 0.77
RtcbQ99LF4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RtcbQ99LF4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RtcbQ99LF4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RtcbQ99LF4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RtcbQ99LF4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RtcbQ99LF4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.87■□□□□ 0.77
RtcbQ99LF4 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RtcbQ99LF4 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RtcbQ99LF4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RtcbQ99LF4 Gm15358-201ENSMUST00000119249 520 ntBASIC19.87■□□□□ 0.77
RtcbQ99LF4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.87■□□□□ 0.77
RtcbQ99LF4 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RtcbQ99LF4 Gm27494-201ENSMUST00000184735 189 ntBASIC19.87■□□□□ 0.77
RtcbQ99LF4 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RtcbQ99LF4 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RtcbQ99LF4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
RtcbQ99LF4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RtcbQ99LF4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RtcbQ99LF4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.87■□□□□ 0.77
RtcbQ99LF4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RtcbQ99LF4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RtcbQ99LF4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RtcbQ99LF4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RtcbQ99LF4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms