Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfc4Q99J62 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfc4Q99J62 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfc4Q99J62 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Rfc4Q99J62 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Rfc4Q99J62 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfc4Q99J62 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfc4Q99J62 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfc4Q99J62 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfc4Q99J62 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Rfc4Q99J62 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rfc4Q99J62 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rfc4Q99J62 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.58■□□□□ 0.56
Rfc4Q99J62 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfc4Q99J62 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Rfc4Q99J62 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rfc4Q99J62 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rfc4Q99J62 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfc4Q99J62 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.58■□□□□ 0.56
Rfc4Q99J62 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rfc4Q99J62 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfc4Q99J62 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Rfc4Q99J62 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfc4Q99J62 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfc4Q99J62 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.58■□□□□ 0.56
Rfc4Q99J62 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rfc4Q99J62 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.57■□□□□ 0.56
Rfc4Q99J62 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfc4Q99J62 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfc4Q99J62 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfc4Q99J62 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rfc4Q99J62 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfc4Q99J62 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfc4Q99J62 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rfc4Q99J62 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.57■□□□□ 0.56
Rfc4Q99J62 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfc4Q99J62 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rfc4Q99J62 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfc4Q99J62 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rfc4Q99J62 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfc4Q99J62 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfc4Q99J62 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.57■□□□□ 0.56
Rfc4Q99J62 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rfc4Q99J62 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfc4Q99J62 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfc4Q99J62 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rfc4Q99J62 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfc4Q99J62 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Rfc4Q99J62 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rfc4Q99J62 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rfc4Q99J62 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfc4Q99J62 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfc4Q99J62 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfc4Q99J62 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfc4Q99J62 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Rfc4Q99J62 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfc4Q99J62 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfc4Q99J62 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfc4Q99J62 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfc4Q99J62 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfc4Q99J62 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfc4Q99J62 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rfc4Q99J62 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfc4Q99J62 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rfc4Q99J62 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rfc4Q99J62 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfc4Q99J62 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfc4Q99J62 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfc4Q99J62 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Rfc4Q99J62 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.55■□□□□ 0.56
Rfc4Q99J62 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.55■□□□□ 0.56
Rfc4Q99J62 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.55■□□□□ 0.56
Rfc4Q99J62 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfc4Q99J62 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rfc4Q99J62 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rfc4Q99J62 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfc4Q99J62 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rfc4Q99J62 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rfc4Q99J62 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms