Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Gm27867-201ENSMUST00000184778 125 ntBASIC16.98■□□□□ 0.31
Pcdha11Q91Y19 Gm34391-201ENSMUST00000203706 907 ntBASIC16.98■□□□□ 0.31
Pcdha11Q91Y19 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha11Q91Y19 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha11Q91Y19 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pcdha11Q91Y19 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha11Q91Y19 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha11Q91Y19 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha11Q91Y19 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha11Q91Y19 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha11Q91Y19 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha11Q91Y19 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pcdha11Q91Y19 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha11Q91Y19 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Pcdha11Q91Y19 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha11Q91Y19 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha11Q91Y19 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha11Q91Y19 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha11Q91Y19 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha11Q91Y19 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.96■□□□□ 0.31
Pcdha11Q91Y19 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha11Q91Y19 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.96■□□□□ 0.31
Pcdha11Q91Y19 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.96■□□□□ 0.31
Pcdha11Q91Y19 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.96■□□□□ 0.31
Pcdha11Q91Y19 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.96■□□□□ 0.31
Pcdha11Q91Y19 Birc2-201ENSMUST00000054878 378 ntBASIC16.96■□□□□ 0.31
Pcdha11Q91Y19 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha11Q91Y19 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha11Q91Y19 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha11Q91Y19 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha11Q91Y19 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha11Q91Y19 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha11Q91Y19 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha11Q91Y19 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Pcdha11Q91Y19 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Pcdha11Q91Y19 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdha11Q91Y19 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdha11Q91Y19 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdha11Q91Y19 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Gm43347-201ENSMUST00000200226 580 ntBASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha11Q91Y19 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms