Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb20Q91XZ9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb20Q91XZ9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Gm17971-201ENSMUST00000190239 806 ntBASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Gm36967-201ENSMUST00000193814 266 ntBASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdhb20Q91XZ9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Gm12895-201ENSMUST00000122214 226 ntBASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Gm8679-201ENSMUST00000210651 1036 ntBASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdhb20Q91XZ9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Gm15372-201ENSMUST00000120729 834 ntBASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms