Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Gm36967-201ENSMUST00000193814 266 ntBASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb8Q91XZ2 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb8Q91XZ2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Gm11355-201ENSMUST00000121120 306 ntBASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.8■□□□□ 0.12
Pcdhb8Q91XZ2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb8Q91XZ2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb8Q91XZ2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhb8Q91XZ2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb8Q91XZ2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb8Q91XZ2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Pcdhb8Q91XZ2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms