Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Gm28196-201ENSMUST00000187719 640 ntBASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb4Q91XX6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhgb4Q91XX6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhgb4Q91XX6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhgb4Q91XX6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb4Q91XX6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhgb4Q91XX6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb4Q91XX6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb4Q91XX6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb4Q91XX6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb4Q91XX6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhgb4Q91XX6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb4Q91XX6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb4Q91XX6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdhgb4Q91XX6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhgb4Q91XX6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb4Q91XX6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb4Q91XX6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb4Q91XX6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb4Q91XX6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb4Q91XX6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb4Q91XX6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb4Q91XX6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb4Q91XX6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb4Q91XX6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb4Q91XX6 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Gm11355-201ENSMUST00000121120 306 ntBASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms