Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.52■□□□□ 0.56
Ddx41Q91VN6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Ddx41Q91VN6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Ddx41Q91VN6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx41Q91VN6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx41Q91VN6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx41Q91VN6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.52■□□□□ 0.55
Ddx41Q91VN6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx41Q91VN6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx41Q91VN6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx41Q91VN6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx41Q91VN6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ddx41Q91VN6 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.51■□□□□ 0.55
Ddx41Q91VN6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx41Q91VN6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx41Q91VN6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
Ddx41Q91VN6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ddx41Q91VN6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx41Q91VN6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx41Q91VN6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.51■□□□□ 0.55
Ddx41Q91VN6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Ddx41Q91VN6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx41Q91VN6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx41Q91VN6 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx41Q91VN6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx41Q91VN6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx41Q91VN6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx41Q91VN6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ddx41Q91VN6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.5■□□□□ 0.55
Ddx41Q91VN6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx41Q91VN6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.5■□□□□ 0.55
Ddx41Q91VN6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ddx41Q91VN6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx41Q91VN6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx41Q91VN6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx41Q91VN6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.5■□□□□ 0.55
Ddx41Q91VN6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.5■□□□□ 0.55
Ddx41Q91VN6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx41Q91VN6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx41Q91VN6 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx41Q91VN6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx41Q91VN6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx41Q91VN6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx41Q91VN6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx41Q91VN6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx41Q91VN6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.5■□□□□ 0.55
Ddx41Q91VN6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx41Q91VN6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx41Q91VN6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx41Q91VN6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx41Q91VN6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ddx41Q91VN6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx41Q91VN6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx41Q91VN6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.49■□□□□ 0.55
Ddx41Q91VN6 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.49■□□□□ 0.55
Ddx41Q91VN6 Gm27459-201ENSMUST00000184860 107 ntBASIC18.49■□□□□ 0.55
Ddx41Q91VN6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx41Q91VN6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx41Q91VN6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx41Q91VN6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx41Q91VN6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx41Q91VN6 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx41Q91VN6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx41Q91VN6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx41Q91VN6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx41Q91VN6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms