Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb11Q91UZ8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb11Q91UZ8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb11Q91UZ8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdhb11Q91UZ8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdhb11Q91UZ8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb11Q91UZ8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdhb11Q91UZ8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb11Q91UZ8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb11Q91UZ8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb11Q91UZ8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.55■□□□□ 0.24
Pcdhb11Q91UZ8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhb11Q91UZ8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb11Q91UZ8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb11Q91UZ8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb11Q91UZ8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb11Q91UZ8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Pcdhb11Q91UZ8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb11Q91UZ8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb11Q91UZ8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.55■□□□□ 0.24
Pcdhb11Q91UZ8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb11Q91UZ8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.55■□□□□ 0.24
Pcdhb11Q91UZ8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb11Q91UZ8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb11Q91UZ8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb11Q91UZ8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb11Q91UZ8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb11Q91UZ8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb11Q91UZ8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb11Q91UZ8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb11Q91UZ8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb11Q91UZ8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb11Q91UZ8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb11Q91UZ8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb11Q91UZ8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb11Q91UZ8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb11Q91UZ8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb11Q91UZ8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb11Q91UZ8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb11Q91UZ8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb11Q91UZ8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb11Q91UZ8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb11Q91UZ8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb11Q91UZ8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb11Q91UZ8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.53■□□□□ 0.24
Pcdhb11Q91UZ8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Pcdhb11Q91UZ8 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.53■□□□□ 0.24
Pcdhb11Q91UZ8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb11Q91UZ8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb11Q91UZ8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb11Q91UZ8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.53■□□□□ 0.24
Pcdhb11Q91UZ8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb11Q91UZ8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Pcdhb11Q91UZ8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb11Q91UZ8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhb11Q91UZ8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb11Q91UZ8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb11Q91UZ8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb11Q91UZ8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.52■□□□□ 0.24
Pcdhb11Q91UZ8 Gm14859-201ENSMUST00000117752 357 ntBASIC16.52■□□□□ 0.24
Pcdhb11Q91UZ8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb11Q91UZ8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb11Q91UZ8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb11Q91UZ8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb11Q91UZ8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb11Q91UZ8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb11Q91UZ8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb11Q91UZ8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb11Q91UZ8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pcdhb11Q91UZ8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb11Q91UZ8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb11Q91UZ8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb11Q91UZ8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb11Q91UZ8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb11Q91UZ8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb11Q91UZ8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms