Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
StrcQ8VIM6 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
StrcQ8VIM6 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
StrcQ8VIM6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
StrcQ8VIM6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.2■□□□□ 0.66
StrcQ8VIM6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
StrcQ8VIM6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
StrcQ8VIM6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
StrcQ8VIM6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
StrcQ8VIM6 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
StrcQ8VIM6 Gm5866-201ENSMUST00000177881 973 ntBASIC19.2■□□□□ 0.66
StrcQ8VIM6 Gm10253-201ENSMUST00000194270 940 ntBASIC19.2■□□□□ 0.66
StrcQ8VIM6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC19.2■□□□□ 0.66
StrcQ8VIM6 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
StrcQ8VIM6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
StrcQ8VIM6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
StrcQ8VIM6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.19■□□□□ 0.66
StrcQ8VIM6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
StrcQ8VIM6 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
StrcQ8VIM6 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
StrcQ8VIM6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC19.19■□□□□ 0.66
StrcQ8VIM6 Gm19164-201ENSMUST00000210667 640 ntBASIC19.19■□□□□ 0.66
StrcQ8VIM6 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.19■□□□□ 0.66
StrcQ8VIM6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
StrcQ8VIM6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.19■□□□□ 0.66
StrcQ8VIM6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
StrcQ8VIM6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
StrcQ8VIM6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.19■□□□□ 0.66
StrcQ8VIM6 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
StrcQ8VIM6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
StrcQ8VIM6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
StrcQ8VIM6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC19.18■□□□□ 0.66
StrcQ8VIM6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
StrcQ8VIM6 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC19.18■□□□□ 0.66
StrcQ8VIM6 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
StrcQ8VIM6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
StrcQ8VIM6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
StrcQ8VIM6 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
StrcQ8VIM6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
StrcQ8VIM6 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.18■□□□□ 0.66
StrcQ8VIM6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
StrcQ8VIM6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
StrcQ8VIM6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
StrcQ8VIM6 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
StrcQ8VIM6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
StrcQ8VIM6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
StrcQ8VIM6 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC19.18■□□□□ 0.66
StrcQ8VIM6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
StrcQ8VIM6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
StrcQ8VIM6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
StrcQ8VIM6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Gm43767-201ENSMUST00000198933 381 ntBASIC19.17■□□□□ 0.66
StrcQ8VIM6 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC19.17■□□□□ 0.66
StrcQ8VIM6 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Gm2423-201ENSMUST00000074863 733 ntBASIC19.17■□□□□ 0.66
StrcQ8VIM6 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
StrcQ8VIM6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
StrcQ8VIM6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
StrcQ8VIM6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.16■□□□□ 0.66
StrcQ8VIM6 AC166341.4-201ENSMUST00000220625 123 ntBASIC19.16■□□□□ 0.66
StrcQ8VIM6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
StrcQ8VIM6 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.16■□□□□ 0.66
StrcQ8VIM6 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
StrcQ8VIM6 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
StrcQ8VIM6 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
StrcQ8VIM6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
StrcQ8VIM6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
StrcQ8VIM6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.16■□□□□ 0.66
StrcQ8VIM6 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC19.16■□□□□ 0.66
StrcQ8VIM6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
StrcQ8VIM6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
StrcQ8VIM6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.16■□□□□ 0.66
StrcQ8VIM6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
StrcQ8VIM6 Gm25287-201ENSMUST00000103846 110 ntBASIC19.16■□□□□ 0.66
StrcQ8VIM6 Gm22918-201ENSMUST00000103855 110 ntBASIC19.16■□□□□ 0.66
StrcQ8VIM6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.16■□□□□ 0.66
StrcQ8VIM6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
StrcQ8VIM6 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
StrcQ8VIM6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.15■□□□□ 0.66
StrcQ8VIM6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
StrcQ8VIM6 Gm6018-201ENSMUST00000216090 1306 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms