Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Gm8825-201ENSMUST00000182565 998 ntBASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lmcd1Q8VEE1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 Mir6977-201ENSMUST00000184960 64 ntBASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Lmcd1Q8VEE1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Gm15427-201ENSMUST00000117288 531 ntBASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Gm11424-201ENSMUST00000121929 829 ntBASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Gm25948-201ENSMUST00000175334 112 ntBASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Gm27301-201ENSMUST00000184012 127 ntBASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Lmcd1Q8VEE1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms