Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnajc28Q8VCE1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 Gm15165-201ENSMUST00000118140 502 ntBASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Dnajc28Q8VCE1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Dnajc28Q8VCE1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Dnajc28Q8VCE1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.61■□□□□ 0.41
Dnajc28Q8VCE1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Dnajc28Q8VCE1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Dnajc28Q8VCE1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.61■□□□□ 0.41
Dnajc28Q8VCE1 Gm44430-201ENSMUST00000203376 995 ntBASIC17.61■□□□□ 0.41
Dnajc28Q8VCE1 Gm6376-201ENSMUST00000209407 580 ntBASIC17.61■□□□□ 0.41
Dnajc28Q8VCE1 Gm5867-201ENSMUST00000063197 592 ntBASIC17.61■□□□□ 0.41
Dnajc28Q8VCE1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Dnajc28Q8VCE1 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.61■□□□□ 0.41
Dnajc28Q8VCE1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Dnajc28Q8VCE1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Dnajc28Q8VCE1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Dnajc28Q8VCE1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Dnajc28Q8VCE1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Dnajc28Q8VCE1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Dnajc28Q8VCE1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Dnajc28Q8VCE1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Gm44454-201ENSMUST00000198541 138 ntBASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Dnajc28Q8VCE1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Dnajc28Q8VCE1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms