Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rpap2Q8VC34 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rpap2Q8VC34 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpap2Q8VC34 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpap2Q8VC34 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpap2Q8VC34 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpap2Q8VC34 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Gm7284-201ENSMUST00000131667 944 ntBASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpap2Q8VC34 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rpap2Q8VC34 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rpap2Q8VC34 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpap2Q8VC34 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpap2Q8VC34 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.71■□□□□ 0.43
Rpap2Q8VC34 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rpap2Q8VC34 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.71■□□□□ 0.43
Rpap2Q8VC34 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rpap2Q8VC34 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpap2Q8VC34 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.71■□□□□ 0.43
Rpap2Q8VC34 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms