Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.65■□□□□ 0.1
Cdt1Q8R4E9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdt1Q8R4E9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Gm12895-201ENSMUST00000122214 226 ntBASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdt1Q8R4E9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdt1Q8R4E9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdt1Q8R4E9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdt1Q8R4E9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdt1Q8R4E9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdt1Q8R4E9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdt1Q8R4E9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdt1Q8R4E9 Gm15794-201ENSMUST00000120182 631 ntBASIC15.62■□□□□ 0.09
Cdt1Q8R4E9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdt1Q8R4E9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Cdt1Q8R4E9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.62■□□□□ 0.09
Cdt1Q8R4E9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cdt1Q8R4E9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdt1Q8R4E9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cdt1Q8R4E9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdt1Q8R4E9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdt1Q8R4E9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdt1Q8R4E9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdt1Q8R4E9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdt1Q8R4E9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdt1Q8R4E9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdt1Q8R4E9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms