Protein–RNA interactions for Protein: Q8R3P8

Rnf113a1, Ring finger protein 113A1, mousemouse

Predictions only

Length 341 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf113a1Q8R3P8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf113a1Q8R3P8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rnf113a1Q8R3P8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Gm27741-201ENSMUST00000185060 237 ntBASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf113a1Q8R3P8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms