Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 AA414768-201ENSMUST00000121924 1257 ntBASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Gm29518-201ENSMUST00000190858 372 ntBASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Gm17808-201ENSMUST00000200859 894 ntBASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Atf7Q8R0S1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Atf7Q8R0S1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf7Q8R0S1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf7Q8R0S1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.09■□□□□ 0.65
Atf7Q8R0S1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf7Q8R0S1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Atf7Q8R0S1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf7Q8R0S1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf7Q8R0S1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf7Q8R0S1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Atf7Q8R0S1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Atf7Q8R0S1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf7Q8R0S1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Atf7Q8R0S1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.09■□□□□ 0.65
Atf7Q8R0S1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.09■□□□□ 0.65
Atf7Q8R0S1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf7Q8R0S1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf7Q8R0S1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf7Q8R0S1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf7Q8R0S1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.09■□□□□ 0.65
Atf7Q8R0S1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.08■□□□□ 0.65
Atf7Q8R0S1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.08■□□□□ 0.65
Atf7Q8R0S1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Atf7Q8R0S1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Atf7Q8R0S1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Atf7Q8R0S1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.08■□□□□ 0.65
Atf7Q8R0S1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Atf7Q8R0S1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Atf7Q8R0S1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atf7Q8R0S1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atf7Q8R0S1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Atf7Q8R0S1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atf7Q8R0S1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atf7Q8R0S1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Atf7Q8R0S1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atf7Q8R0S1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Atf7Q8R0S1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atf7Q8R0S1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Atf7Q8R0S1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atf7Q8R0S1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf7Q8R0S1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.07■□□□□ 0.64
Atf7Q8R0S1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Atf7Q8R0S1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Atf7Q8R0S1 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf7Q8R0S1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Atf7Q8R0S1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf7Q8R0S1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf7Q8R0S1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Atf7Q8R0S1 Gm45328-201ENSMUST00000210942 917 ntBASIC19.07■□□□□ 0.64
Atf7Q8R0S1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Atf7Q8R0S1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Atf7Q8R0S1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Atf7Q8R0S1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Atf7Q8R0S1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Atf7Q8R0S1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf7Q8R0S1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
Atf7Q8R0S1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf7Q8R0S1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf7Q8R0S1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf7Q8R0S1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf7Q8R0S1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Atf7Q8R0S1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf7Q8R0S1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf7Q8R0S1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Atf7Q8R0S1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf7Q8R0S1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Atf7Q8R0S1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf7Q8R0S1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf7Q8R0S1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.06■□□□□ 0.64
Atf7Q8R0S1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf7Q8R0S1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Atf7Q8R0S1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf7Q8R0S1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf7Q8R0S1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.06■□□□□ 0.64
Atf7Q8R0S1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf7Q8R0S1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf7Q8R0S1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf7Q8R0S1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms