Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn1Q8K445 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn1Q8K445 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn1Q8K445 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn1Q8K445 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn1Q8K445 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Clrn1Q8K445 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn1Q8K445 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Clrn1Q8K445 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.27■□□□□ 0.04
Clrn1Q8K445 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn1Q8K445 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn1Q8K445 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Clrn1Q8K445 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Clrn1Q8K445 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn1Q8K445 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn1Q8K445 Gm10052-201ENSMUST00000168019 960 ntBASIC15.27■□□□□ 0.04
Clrn1Q8K445 Gm36967-201ENSMUST00000193814 266 ntBASIC15.27■□□□□ 0.04
Clrn1Q8K445 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn1Q8K445 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn1Q8K445 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Clrn1Q8K445 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn1Q8K445 Gm7729-201ENSMUST00000050143 801 ntBASIC15.27■□□□□ 0.04
Clrn1Q8K445 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Clrn1Q8K445 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn1Q8K445 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clrn1Q8K445 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clrn1Q8K445 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clrn1Q8K445 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.27■□□□□ 0.03
Clrn1Q8K445 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.27■□□□□ 0.03
Clrn1Q8K445 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clrn1Q8K445 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Clrn1Q8K445 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Clrn1Q8K445 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Clrn1Q8K445 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clrn1Q8K445 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.26■□□□□ 0.03
Clrn1Q8K445 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn1Q8K445 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn1Q8K445 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn1Q8K445 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn1Q8K445 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn1Q8K445 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn1Q8K445 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn1Q8K445 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.26■□□□□ 0.03
Clrn1Q8K445 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Clrn1Q8K445 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn1Q8K445 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn1Q8K445 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn1Q8K445 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn1Q8K445 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Clrn1Q8K445 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn1Q8K445 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Clrn1Q8K445 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn1Q8K445 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn1Q8K445 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn1Q8K445 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn1Q8K445 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn1Q8K445 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn1Q8K445 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn1Q8K445 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Clrn1Q8K445 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clrn1Q8K445 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clrn1Q8K445 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn1Q8K445 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.24■□□□□ 0.03
Clrn1Q8K445 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn1Q8K445 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn1Q8K445 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Clrn1Q8K445 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn1Q8K445 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn1Q8K445 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Clrn1Q8K445 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.24■□□□□ 0.03
Clrn1Q8K445 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn1Q8K445 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn1Q8K445 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clrn1Q8K445 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.24■□□□□ 0.03
Clrn1Q8K445 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.24■□□□□ 0.03
Clrn1Q8K445 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Clrn1Q8K445 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms