Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cnot3Q8K0V4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cnot3Q8K0V4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cnot3Q8K0V4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cnot3Q8K0V4 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.24■□□□□ 0.03
Cnot3Q8K0V4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cnot3Q8K0V4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.24■□□□□ 0.03
Cnot3Q8K0V4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cnot3Q8K0V4 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cnot3Q8K0V4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cnot3Q8K0V4 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnot3Q8K0V4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnot3Q8K0V4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnot3Q8K0V4 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnot3Q8K0V4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnot3Q8K0V4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cnot3Q8K0V4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnot3Q8K0V4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnot3Q8K0V4 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnot3Q8K0V4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Cnot3Q8K0V4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Cnot3Q8K0V4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.23■□□□□ 0.03
Cnot3Q8K0V4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.23■□□□□ 0.03
Cnot3Q8K0V4 Il3ra-202ENSMUST00000223589 738 ntBASIC15.23■□□□□ 0.03
Cnot3Q8K0V4 Gm10602-201ENSMUST00000098239 609 ntBASIC15.23■□□□□ 0.03
Cnot3Q8K0V4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnot3Q8K0V4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnot3Q8K0V4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cnot3Q8K0V4 Sybu-209ENSMUST00000228639 4113 ntBASIC15.23■□□□□ 0.03
Cnot3Q8K0V4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cnot3Q8K0V4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnot3Q8K0V4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Cnot3Q8K0V4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnot3Q8K0V4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnot3Q8K0V4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.22■□□□□ 0.03
Cnot3Q8K0V4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.22■□□□□ 0.03
Cnot3Q8K0V4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Cnot3Q8K0V4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnot3Q8K0V4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnot3Q8K0V4 Gm7638-201ENSMUST00000121348 967 ntBASIC15.22■□□□□ 0.03
Cnot3Q8K0V4 Gm37179-201ENSMUST00000194862 823 ntBASIC15.22■□□□□ 0.03
Cnot3Q8K0V4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.22■□□□□ 0.03
Cnot3Q8K0V4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cnot3Q8K0V4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Cnot3Q8K0V4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnot3Q8K0V4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.22■□□□□ 0.03
Cnot3Q8K0V4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cnot3Q8K0V4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnot3Q8K0V4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cnot3Q8K0V4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cnot3Q8K0V4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cnot3Q8K0V4 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cnot3Q8K0V4 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cnot3Q8K0V4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cnot3Q8K0V4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cnot3Q8K0V4 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cnot3Q8K0V4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.21■□□□□ 0.03
Cnot3Q8K0V4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cnot3Q8K0V4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cnot3Q8K0V4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cnot3Q8K0V4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cnot3Q8K0V4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cnot3Q8K0V4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cnot3Q8K0V4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cnot3Q8K0V4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.21■□□□□ 0.02
Cnot3Q8K0V4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.02
Cnot3Q8K0V4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cnot3Q8K0V4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cnot3Q8K0V4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cnot3Q8K0V4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cnot3Q8K0V4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cnot3Q8K0V4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cnot3Q8K0V4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.19■□□□□ 0.02
Cnot3Q8K0V4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms