Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hmgcs1Q8JZK9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgcs1Q8JZK9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Hmgcs1Q8JZK9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgcs1Q8JZK9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgcs1Q8JZK9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgcs1Q8JZK9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgcs1Q8JZK9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgcs1Q8JZK9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgcs1Q8JZK9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hmgcs1Q8JZK9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.46■□□□□ 0.06
Hmgcs1Q8JZK9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.46■□□□□ 0.06
Hmgcs1Q8JZK9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Hmgcs1Q8JZK9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Hmgcs1Q8JZK9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Gm15565-201ENSMUST00000118890 427 ntBASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Mir1668-201ENSMUST00000184114 107 ntBASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Gm29707-201ENSMUST00000196325 491 ntBASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hmgcs1Q8JZK9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Hmgcs1Q8JZK9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Gm36967-201ENSMUST00000193814 266 ntBASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Gm45058-201ENSMUST00000205810 766 ntBASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Gm18959-201ENSMUST00000208954 655 ntBASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgcs1Q8JZK9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgcs1Q8JZK9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms