Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CroccQ8CJ40 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.47■□□□□ 0.07
CroccQ8CJ40 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CroccQ8CJ40 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CroccQ8CJ40 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CroccQ8CJ40 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CroccQ8CJ40 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CroccQ8CJ40 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CroccQ8CJ40 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CroccQ8CJ40 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CroccQ8CJ40 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CroccQ8CJ40 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CroccQ8CJ40 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CroccQ8CJ40 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.46■□□□□ 0.07
CroccQ8CJ40 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.46■□□□□ 0.07
CroccQ8CJ40 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CroccQ8CJ40 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CroccQ8CJ40 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CroccQ8CJ40 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.46■□□□□ 0.07
CroccQ8CJ40 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.46■□□□□ 0.07
CroccQ8CJ40 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.46■□□□□ 0.07
CroccQ8CJ40 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CroccQ8CJ40 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CroccQ8CJ40 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CroccQ8CJ40 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CroccQ8CJ40 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CroccQ8CJ40 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CroccQ8CJ40 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CroccQ8CJ40 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CroccQ8CJ40 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CroccQ8CJ40 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CroccQ8CJ40 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.45■□□□□ 0.06
CroccQ8CJ40 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CroccQ8CJ40 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CroccQ8CJ40 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CroccQ8CJ40 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CroccQ8CJ40 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.45■□□□□ 0.06
CroccQ8CJ40 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CroccQ8CJ40 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CroccQ8CJ40 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CroccQ8CJ40 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.45■□□□□ 0.06
CroccQ8CJ40 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
CroccQ8CJ40 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CroccQ8CJ40 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CroccQ8CJ40 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CroccQ8CJ40 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CroccQ8CJ40 Gm15794-201ENSMUST00000120182 631 ntBASIC15.44■□□□□ 0.06
CroccQ8CJ40 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.44■□□□□ 0.06
CroccQ8CJ40 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CroccQ8CJ40 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Gm7284-201ENSMUST00000131667 944 ntBASIC15.43■□□□□ 0.06
CroccQ8CJ40 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CroccQ8CJ40 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CroccQ8CJ40 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.43■□□□□ 0.06
CroccQ8CJ40 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CroccQ8CJ40 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms