Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clip4Q8CI96 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clip4Q8CI96 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Gm11355-201ENSMUST00000121120 306 ntBASIC16.32■□□□□ 0.2
Clip4Q8CI96 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Gm6345-202ENSMUST00000180900 204 ntBASIC16.32■□□□□ 0.2
Clip4Q8CI96 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.32■□□□□ 0.2
Clip4Q8CI96 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.32■□□□□ 0.2
Clip4Q8CI96 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Gm9013-201ENSMUST00000132939 882 ntBASIC16.31■□□□□ 0.2
Clip4Q8CI96 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clip4Q8CI96 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clip4Q8CI96 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clip4Q8CI96 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clip4Q8CI96 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.3■□□□□ 0.2
Clip4Q8CI96 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clip4Q8CI96 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Clip4Q8CI96 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.3■□□□□ 0.2
Clip4Q8CI96 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clip4Q8CI96 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.3■□□□□ 0.2
Clip4Q8CI96 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clip4Q8CI96 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clip4Q8CI96 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.3■□□□□ 0.2
Clip4Q8CI96 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clip4Q8CI96 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clip4Q8CI96 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.3■□□□□ 0.2
Clip4Q8CI96 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Clip4Q8CI96 Gm5587-201ENSMUST00000206270 674 ntBASIC16.3■□□□□ 0.2
Clip4Q8CI96 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clip4Q8CI96 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Clip4Q8CI96 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Clip4Q8CI96 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clip4Q8CI96 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clip4Q8CI96 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Clip4Q8CI96 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clip4Q8CI96 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.3■□□□□ 0.2
Clip4Q8CI96 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clip4Q8CI96 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clip4Q8CI96 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clip4Q8CI96 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clip4Q8CI96 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clip4Q8CI96 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.29■□□□□ 0.2
Clip4Q8CI96 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clip4Q8CI96 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms