Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh1Q8CGV4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh1Q8CGV4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh1Q8CGV4 Gm7862-201ENSMUST00000121461 292 ntBASIC15.67■□□□□ 0.1
Rdh1Q8CGV4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.67■□□□□ 0.1
Rdh1Q8CGV4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh1Q8CGV4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh1Q8CGV4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Rdh1Q8CGV4 Gm9172-201ENSMUST00000212092 954 ntBASIC15.67■□□□□ 0.1
Rdh1Q8CGV4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh1Q8CGV4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh1Q8CGV4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh1Q8CGV4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh1Q8CGV4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh1Q8CGV4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh1Q8CGV4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh1Q8CGV4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.67■□□□□ 0.1
Rdh1Q8CGV4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh1Q8CGV4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh1Q8CGV4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh1Q8CGV4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh1Q8CGV4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh1Q8CGV4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh1Q8CGV4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rdh1Q8CGV4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rdh1Q8CGV4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh1Q8CGV4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh1Q8CGV4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh1Q8CGV4 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh1Q8CGV4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh1Q8CGV4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh1Q8CGV4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.66■□□□□ 0.1
Rdh1Q8CGV4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh1Q8CGV4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh1Q8CGV4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.66■□□□□ 0.1
Rdh1Q8CGV4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh1Q8CGV4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Gm8097-201ENSMUST00000117903 829 ntBASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh1Q8CGV4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.1
Rdh1Q8CGV4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Gm13418-201ENSMUST00000119097 944 ntBASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Gm18733-201ENSMUST00000173950 856 ntBASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Gm4535-201ENSMUST00000182274 558 ntBASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Gm10355-201ENSMUST00000097146 517 ntBASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh1Q8CGV4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh1Q8CGV4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms