Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smc5Q8CG46 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smc5Q8CG46 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smc5Q8CG46 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Smc5Q8CG46 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC20.02■□□□□ 0.79
Smc5Q8CG46 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc5Q8CG46 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc5Q8CG46 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc5Q8CG46 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC20.01■□□□□ 0.79
Smc5Q8CG46 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc5Q8CG46 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Smc5Q8CG46 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc5Q8CG46 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smc5Q8CG46 Gm26039-201ENSMUST00000158152 144 ntBASIC20.01■□□□□ 0.79
Smc5Q8CG46 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smc5Q8CG46 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smc5Q8CG46 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.01■□□□□ 0.79
Smc5Q8CG46 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc5Q8CG46 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc5Q8CG46 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc5Q8CG46 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc5Q8CG46 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc5Q8CG46 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Smc5Q8CG46 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc5Q8CG46 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc5Q8CG46 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc5Q8CG46 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smc5Q8CG46 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Smc5Q8CG46 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc5Q8CG46 AC132265.1-201ENSMUST00000219233 1665 ntBASIC20■□□□□ 0.79
Smc5Q8CG46 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc5Q8CG46 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc5Q8CG46 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Smc5Q8CG46 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Smc5Q8CG46 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Smc5Q8CG46 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smc5Q8CG46 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Smc5Q8CG46 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc5Q8CG46 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Smc5Q8CG46 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
Smc5Q8CG46 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20■□□□□ 0.79
Smc5Q8CG46 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20■□□□□ 0.79
Smc5Q8CG46 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Smc5Q8CG46 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc5Q8CG46 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc5Q8CG46 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
Smc5Q8CG46 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc5Q8CG46 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Smc5Q8CG46 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc5Q8CG46 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smc5Q8CG46 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc5Q8CG46 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.99■□□□□ 0.79
Smc5Q8CG46 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Smc5Q8CG46 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc5Q8CG46 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc5Q8CG46 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc5Q8CG46 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc5Q8CG46 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc5Q8CG46 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc5Q8CG46 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc5Q8CG46 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc5Q8CG46 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc5Q8CG46 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc5Q8CG46 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.99■□□□□ 0.79
Smc5Q8CG46 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
Smc5Q8CG46 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Smc5Q8CG46 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc5Q8CG46 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smc5Q8CG46 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc5Q8CG46 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc5Q8CG46 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC19.98■□□□□ 0.79
Smc5Q8CG46 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc5Q8CG46 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.98■□□□□ 0.79
Smc5Q8CG46 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Smc5Q8CG46 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc5Q8CG46 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
Smc5Q8CG46 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Smc5Q8CG46 Gm13559-201ENSMUST00000120476 863 ntBASIC19.98■□□□□ 0.79
Smc5Q8CG46 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Smc5Q8CG46 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smc5Q8CG46 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.98■□□□□ 0.79
Smc5Q8CG46 Gm27011-201ENSMUST00000182352 972 ntBASIC19.98■□□□□ 0.79
Smc5Q8CG46 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.98■□□□□ 0.79
Smc5Q8CG46 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Smc5Q8CG46 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Smc5Q8CG46 AC154412.1-201ENSMUST00000226540 2786 ntBASIC19.98■□□□□ 0.79
Smc5Q8CG46 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc5Q8CG46 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Smc5Q8CG46 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc5Q8CG46 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc5Q8CG46 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC19.98■□□□□ 0.79
Smc5Q8CG46 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smc5Q8CG46 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc5Q8CG46 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc5Q8CG46 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Smc5Q8CG46 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc5Q8CG46 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smc5Q8CG46 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc5Q8CG46 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smc5Q8CG46 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms