Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brf1Q8CFK2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Brf1Q8CFK2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brf1Q8CFK2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Brf1Q8CFK2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.52■□□□□ 0.72
Brf1Q8CFK2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Brf1Q8CFK2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.52■□□□□ 0.72
Brf1Q8CFK2 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.52■□□□□ 0.72
Brf1Q8CFK2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brf1Q8CFK2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brf1Q8CFK2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brf1Q8CFK2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brf1Q8CFK2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brf1Q8CFK2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Brf1Q8CFK2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.52■□□□□ 0.71
Brf1Q8CFK2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Brf1Q8CFK2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Brf1Q8CFK2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Brf1Q8CFK2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Brf1Q8CFK2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brf1Q8CFK2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brf1Q8CFK2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brf1Q8CFK2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Brf1Q8CFK2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brf1Q8CFK2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brf1Q8CFK2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brf1Q8CFK2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brf1Q8CFK2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.51■□□□□ 0.71
Brf1Q8CFK2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.51■□□□□ 0.71
Brf1Q8CFK2 Gm14859-201ENSMUST00000117752 357 ntBASIC19.51■□□□□ 0.71
Brf1Q8CFK2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Brf1Q8CFK2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Brf1Q8CFK2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brf1Q8CFK2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Brf1Q8CFK2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Brf1Q8CFK2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brf1Q8CFK2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.51■□□□□ 0.71
Brf1Q8CFK2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Brf1Q8CFK2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brf1Q8CFK2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brf1Q8CFK2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Brf1Q8CFK2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brf1Q8CFK2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Brf1Q8CFK2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brf1Q8CFK2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brf1Q8CFK2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Brf1Q8CFK2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Brf1Q8CFK2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.5■□□□□ 0.71
Brf1Q8CFK2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Brf1Q8CFK2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Brf1Q8CFK2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brf1Q8CFK2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brf1Q8CFK2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brf1Q8CFK2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Brf1Q8CFK2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brf1Q8CFK2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brf1Q8CFK2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brf1Q8CFK2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brf1Q8CFK2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brf1Q8CFK2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.49■□□□□ 0.71
Brf1Q8CFK2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Brf1Q8CFK2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brf1Q8CFK2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Brf1Q8CFK2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brf1Q8CFK2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.49■□□□□ 0.71
Brf1Q8CFK2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brf1Q8CFK2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brf1Q8CFK2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brf1Q8CFK2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brf1Q8CFK2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brf1Q8CFK2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Brf1Q8CFK2 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.49■□□□□ 0.71
Brf1Q8CFK2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brf1Q8CFK2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brf1Q8CFK2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brf1Q8CFK2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Brf1Q8CFK2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms