Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.56■□□□□ 0.08
Slc46a2Q8CA03 Gm18115-201ENSMUST00000221209 621 ntBASIC15.56■□□□□ 0.08
Slc46a2Q8CA03 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc46a2Q8CA03 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Slc46a2Q8CA03 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Slc46a2Q8CA03 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.56■□□□□ 0.08
Slc46a2Q8CA03 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc46a2Q8CA03 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Slc46a2Q8CA03 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc46a2Q8CA03 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc46a2Q8CA03 Phf7-203ENSMUST00000226565 1971 ntBASIC15.56■□□□□ 0.08
Slc46a2Q8CA03 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc46a2Q8CA03 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.56■□□□□ 0.08
Slc46a2Q8CA03 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.56■□□□□ 0.08
Slc46a2Q8CA03 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc46a2Q8CA03 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Slc46a2Q8CA03 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc46a2Q8CA03 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Slc46a2Q8CA03 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Gm10698-201ENSMUST00000182663 604 ntBASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc46a2Q8CA03 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc46a2Q8CA03 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc46a2Q8CA03 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc46a2Q8CA03 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc46a2Q8CA03 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.52■□□□□ 0.08
Slc46a2Q8CA03 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc46a2Q8CA03 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc46a2Q8CA03 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc46a2Q8CA03 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc46a2Q8CA03 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc46a2Q8CA03 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc46a2Q8CA03 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms