Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Gm6623-201ENSMUST00000173570 544 ntBASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Gm6659-201ENSMUST00000174752 547 ntBASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm9949Q8C9F4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm9949Q8C9F4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Gm9949Q8C9F4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm9949Q8C9F4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Gm9949Q8C9F4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm9949Q8C9F4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Gm9949Q8C9F4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm9949Q8C9F4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm9949Q8C9F4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Gm9949Q8C9F4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Gm9949Q8C9F4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.36
Gm9949Q8C9F4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Gm9949Q8C9F4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm9949Q8C9F4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm9949Q8C9F4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm9949Q8C9F4 Gm9013-201ENSMUST00000132939 882 ntBASIC12.77□□□□□ -0.37
Gm9949Q8C9F4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm9949Q8C9F4 Gm5587-201ENSMUST00000206270 674 ntBASIC12.77□□□□□ -0.37
Gm9949Q8C9F4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm9949Q8C9F4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm9949Q8C9F4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm9949Q8C9F4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm9949Q8C9F4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm9949Q8C9F4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm9949Q8C9F4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm9949Q8C9F4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm9949Q8C9F4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.77□□□□□ -0.37
Gm9949Q8C9F4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm9949Q8C9F4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm9949Q8C9F4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm9949Q8C9F4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm9949Q8C9F4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm9949Q8C9F4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.77□□□□□ -0.37
Gm9949Q8C9F4 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.77□□□□□ -0.37
Gm9949Q8C9F4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm9949Q8C9F4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gm9949Q8C9F4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm9949Q8C9F4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gm9949Q8C9F4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm9949Q8C9F4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gm9949Q8C9F4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms