Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.85■□□□□ 0.61
Alx1Q8C8B0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Alx1Q8C8B0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Alx1Q8C8B0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Alx1Q8C8B0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Alx1Q8C8B0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Alx1Q8C8B0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Alx1Q8C8B0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Alx1Q8C8B0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Alx1Q8C8B0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Alx1Q8C8B0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Gm43347-201ENSMUST00000200226 580 ntBASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alx1Q8C8B0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Alx1Q8C8B0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Alx1Q8C8B0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Alx1Q8C8B0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Alx1Q8C8B0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Alx1Q8C8B0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.83■□□□□ 0.6
Alx1Q8C8B0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Alx1Q8C8B0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Alx1Q8C8B0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Alx1Q8C8B0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Alx1Q8C8B0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Alx1Q8C8B0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Alx1Q8C8B0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Alx1Q8C8B0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Alx1Q8C8B0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.83■□□□□ 0.6
Alx1Q8C8B0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Alx1Q8C8B0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Alx1Q8C8B0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Alx1Q8C8B0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alx1Q8C8B0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alx1Q8C8B0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alx1Q8C8B0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alx1Q8C8B0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alx1Q8C8B0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
Alx1Q8C8B0 Gm12497-201ENSMUST00000138778 237 ntBASIC18.82■□□□□ 0.6
Alx1Q8C8B0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.82■□□□□ 0.6
Alx1Q8C8B0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.82■□□□□ 0.6
Alx1Q8C8B0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.82■□□□□ 0.6
Alx1Q8C8B0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Alx1Q8C8B0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alx1Q8C8B0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alx1Q8C8B0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alx1Q8C8B0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Alx1Q8C8B0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Alx1Q8C8B0 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.81■□□□□ 0.6
Alx1Q8C8B0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms