Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim9Q8C7M3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim9Q8C7M3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Trim9Q8C7M3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim9Q8C7M3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim9Q8C7M3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim9Q8C7M3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim9Q8C7M3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim9Q8C7M3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim9Q8C7M3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim9Q8C7M3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim9Q8C7M3 Gm45328-201ENSMUST00000210942 917 ntBASIC17.85■□□□□ 0.45
Trim9Q8C7M3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim9Q8C7M3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.85■□□□□ 0.45
Trim9Q8C7M3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim9Q8C7M3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim9Q8C7M3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim9Q8C7M3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim9Q8C7M3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim9Q8C7M3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim9Q8C7M3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim9Q8C7M3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim9Q8C7M3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim9Q8C7M3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trim9Q8C7M3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim9Q8C7M3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim9Q8C7M3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim9Q8C7M3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim9Q8C7M3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim9Q8C7M3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim9Q8C7M3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim9Q8C7M3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.84■□□□□ 0.45
Trim9Q8C7M3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim9Q8C7M3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Trim9Q8C7M3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim9Q8C7M3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim9Q8C7M3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim9Q8C7M3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim9Q8C7M3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim9Q8C7M3 Gm15794-201ENSMUST00000120182 631 ntBASIC17.84■□□□□ 0.45
Trim9Q8C7M3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim9Q8C7M3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim9Q8C7M3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim9Q8C7M3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim9Q8C7M3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim9Q8C7M3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim9Q8C7M3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Trim9Q8C7M3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.83■□□□□ 0.45
Trim9Q8C7M3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim9Q8C7M3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim9Q8C7M3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim9Q8C7M3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Trim9Q8C7M3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trim9Q8C7M3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim9Q8C7M3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.83■□□□□ 0.44
Trim9Q8C7M3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim9Q8C7M3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trim9Q8C7M3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim9Q8C7M3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim9Q8C7M3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.83■□□□□ 0.44
Trim9Q8C7M3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim9Q8C7M3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim9Q8C7M3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim9Q8C7M3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim9Q8C7M3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim9Q8C7M3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim9Q8C7M3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim9Q8C7M3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trim9Q8C7M3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim9Q8C7M3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim9Q8C7M3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim9Q8C7M3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim9Q8C7M3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim9Q8C7M3 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.81■□□□□ 0.44
Trim9Q8C7M3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Trim9Q8C7M3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim9Q8C7M3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim9Q8C7M3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim9Q8C7M3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms