Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp20Q8C6M1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp20Q8C6M1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp20Q8C6M1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp20Q8C6M1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp20Q8C6M1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Usp20Q8C6M1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp20Q8C6M1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp20Q8C6M1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp20Q8C6M1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp20Q8C6M1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp20Q8C6M1 Gm13418-201ENSMUST00000119097 944 ntBASIC17.83■□□□□ 0.44
Usp20Q8C6M1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.83■□□□□ 0.44
Usp20Q8C6M1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Usp20Q8C6M1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.83■□□□□ 0.44
Usp20Q8C6M1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp20Q8C6M1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp20Q8C6M1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp20Q8C6M1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp20Q8C6M1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp20Q8C6M1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp20Q8C6M1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp20Q8C6M1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp20Q8C6M1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Usp20Q8C6M1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.83■□□□□ 0.44
Usp20Q8C6M1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp20Q8C6M1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp20Q8C6M1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Gm12350-201ENSMUST00000121208 462 ntBASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Usp20Q8C6M1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.81■□□□□ 0.44
Usp20Q8C6M1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp20Q8C6M1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp20Q8C6M1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp20Q8C6M1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp20Q8C6M1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp20Q8C6M1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp20Q8C6M1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp20Q8C6M1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp20Q8C6M1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Usp20Q8C6M1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.81■□□□□ 0.44
Usp20Q8C6M1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp20Q8C6M1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.81■□□□□ 0.44
Usp20Q8C6M1 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.81■□□□□ 0.44
Usp20Q8C6M1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp20Q8C6M1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp20Q8C6M1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp20Q8C6M1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp20Q8C6M1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp20Q8C6M1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp20Q8C6M1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Usp20Q8C6M1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Usp20Q8C6M1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp20Q8C6M1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp20Q8C6M1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp20Q8C6M1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.8■□□□□ 0.44
Usp20Q8C6M1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp20Q8C6M1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp20Q8C6M1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp20Q8C6M1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp20Q8C6M1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp20Q8C6M1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp20Q8C6M1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp20Q8C6M1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp20Q8C6M1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.8■□□□□ 0.44
Usp20Q8C6M1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.8■□□□□ 0.44
Usp20Q8C6M1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp20Q8C6M1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp20Q8C6M1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp20Q8C6M1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp20Q8C6M1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Usp20Q8C6M1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Usp20Q8C6M1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp20Q8C6M1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp20Q8C6M1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Usp20Q8C6M1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms