Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.56□□□□□ -0.24
Smim4Q8C1Q6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smim4Q8C1Q6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Smim4Q8C1Q6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Smim4Q8C1Q6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smim4Q8C1Q6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smim4Q8C1Q6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smim4Q8C1Q6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smim4Q8C1Q6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smim4Q8C1Q6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smim4Q8C1Q6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smim4Q8C1Q6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Smim4Q8C1Q6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Gm44450-201ENSMUST00000199528 114 ntBASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smim4Q8C1Q6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Gm18421-201ENSMUST00000204122 625 ntBASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Gm7213-201ENSMUST00000215977 950 ntBASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smim4Q8C1Q6 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smim4Q8C1Q6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms