Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Vps9d1Q8C190 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.17■□□□□ 0.02
Vps9d1Q8C190 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps9d1Q8C190 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Vps9d1Q8C190 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps9d1Q8C190 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps9d1Q8C190 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps9d1Q8C190 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Vps9d1Q8C190 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps9d1Q8C190 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Vps9d1Q8C190 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps9d1Q8C190 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Vps9d1Q8C190 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps9d1Q8C190 Gm30025-201ENSMUST00000218555 728 ntBASIC15.17■□□□□ 0.02
Vps9d1Q8C190 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps9d1Q8C190 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps9d1Q8C190 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.17■□□□□ 0.02
Vps9d1Q8C190 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps9d1Q8C190 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps9d1Q8C190 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.17■□□□□ 0.02
Vps9d1Q8C190 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps9d1Q8C190 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps9d1Q8C190 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Gm6433-201ENSMUST00000118634 875 ntBASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Gm3375-201ENSMUST00000203929 796 ntBASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.16■□□□□ 0.02
Vps9d1Q8C190 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps9d1Q8C190 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps9d1Q8C190 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps9d1Q8C190 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Vps9d1Q8C190 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps9d1Q8C190 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps9d1Q8C190 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps9d1Q8C190 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vps9d1Q8C190 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps9d1Q8C190 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps9d1Q8C190 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps9d1Q8C190 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps9d1Q8C190 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps9d1Q8C190 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps9d1Q8C190 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps9d1Q8C190 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps9d1Q8C190 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps9d1Q8C190 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps9d1Q8C190 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps9d1Q8C190 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.15■□□□□ 0.02
Vps9d1Q8C190 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps9d1Q8C190 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms