Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nek11Q8C0Q4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nek11Q8C0Q4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nek11Q8C0Q4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nek11Q8C0Q4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nek11Q8C0Q4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nek11Q8C0Q4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nek11Q8C0Q4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nek11Q8C0Q4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.16■□□□□ 0.66
Nek11Q8C0Q4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek11Q8C0Q4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nek11Q8C0Q4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek11Q8C0Q4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek11Q8C0Q4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nek11Q8C0Q4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.16■□□□□ 0.66
Nek11Q8C0Q4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.16■□□□□ 0.66
Nek11Q8C0Q4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Nek11Q8C0Q4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek11Q8C0Q4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.16■□□□□ 0.66
Nek11Q8C0Q4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.16■□□□□ 0.66
Nek11Q8C0Q4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.16■□□□□ 0.66
Nek11Q8C0Q4 Gm7367-201ENSMUST00000057611 492 ntBASIC19.16■□□□□ 0.66
Nek11Q8C0Q4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Nek11Q8C0Q4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek11Q8C0Q4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek11Q8C0Q4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek11Q8C0Q4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 Rprl3-201ENSMUST00000157400 290 ntBASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek11Q8C0Q4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nek11Q8C0Q4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nek11Q8C0Q4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nek11Q8C0Q4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nek11Q8C0Q4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nek11Q8C0Q4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.66
Nek11Q8C0Q4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.14■□□□□ 0.66
Nek11Q8C0Q4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nek11Q8C0Q4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nek11Q8C0Q4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nek11Q8C0Q4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nek11Q8C0Q4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nek11Q8C0Q4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.14■□□□□ 0.65
Nek11Q8C0Q4 Gm21362-201ENSMUST00000194272 928 ntBASIC19.14■□□□□ 0.65
Nek11Q8C0Q4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nek11Q8C0Q4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.14■□□□□ 0.65
Nek11Q8C0Q4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nek11Q8C0Q4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Nek11Q8C0Q4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Nek11Q8C0Q4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nek11Q8C0Q4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nek11Q8C0Q4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nek11Q8C0Q4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nek11Q8C0Q4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nek11Q8C0Q4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nek11Q8C0Q4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nek11Q8C0Q4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms