Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Sh3rf2Q8BZT2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
Sh3rf2Q8BZT2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf2Q8BZT2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf2Q8BZT2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf2Q8BZT2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.35■□□□□ 0.21
Sh3rf2Q8BZT2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf2Q8BZT2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.35■□□□□ 0.21
Sh3rf2Q8BZT2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.35■□□□□ 0.21
Sh3rf2Q8BZT2 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.35■□□□□ 0.21
Sh3rf2Q8BZT2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf2Q8BZT2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf2Q8BZT2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf2Q8BZT2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf2Q8BZT2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf2Q8BZT2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf2Q8BZT2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf2Q8BZT2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Sh3rf2Q8BZT2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf2Q8BZT2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Sh3rf2Q8BZT2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.35■□□□□ 0.21
Sh3rf2Q8BZT2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf2Q8BZT2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf2Q8BZT2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf2Q8BZT2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf2Q8BZT2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf2Q8BZT2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf2Q8BZT2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Sh3rf2Q8BZT2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf2Q8BZT2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
Sh3rf2Q8BZT2 Mir6404-201ENSMUST00000183699 94 ntBASIC16.34■□□□□ 0.21
Sh3rf2Q8BZT2 Gm8655-201ENSMUST00000221159 852 ntBASIC16.34■□□□□ 0.21
Sh3rf2Q8BZT2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf2Q8BZT2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf2Q8BZT2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf2Q8BZT2 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.34■□□□□ 0.21
Sh3rf2Q8BZT2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
Sh3rf2Q8BZT2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf2Q8BZT2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf2Q8BZT2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf2Q8BZT2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Sh3rf2Q8BZT2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf2Q8BZT2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sh3rf2Q8BZT2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sh3rf2Q8BZT2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sh3rf2Q8BZT2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Sh3rf2Q8BZT2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sh3rf2Q8BZT2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 Gm12350-201ENSMUST00000121208 462 ntBASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sh3rf2Q8BZT2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf2Q8BZT2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Sh3rf2Q8BZT2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.32■□□□□ 0.2
Sh3rf2Q8BZT2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf2Q8BZT2 Gm15173-201ENSMUST00000122049 433 ntBASIC16.32■□□□□ 0.2
Sh3rf2Q8BZT2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.32■□□□□ 0.2
Sh3rf2Q8BZT2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf2Q8BZT2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Sh3rf2Q8BZT2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf2Q8BZT2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.32■□□□□ 0.2
Sh3rf2Q8BZT2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf2Q8BZT2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf2Q8BZT2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf2Q8BZT2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Sh3rf2Q8BZT2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf2Q8BZT2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf2Q8BZT2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf2Q8BZT2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh3rf2Q8BZT2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms