Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC22.74■■□□□ 1.23
Usp47Q8BY87 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Usp47Q8BY87 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Usp47Q8BY87 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Usp47Q8BY87 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Usp47Q8BY87 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Usp47Q8BY87 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Usp47Q8BY87 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC22.74■■□□□ 1.23
Usp47Q8BY87 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Usp47Q8BY87 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Usp47Q8BY87 Gm10060-201ENSMUST00000212002 111 ntBASIC22.74■■□□□ 1.23
Usp47Q8BY87 Gm18622-201ENSMUST00000219361 595 ntBASIC22.74■■□□□ 1.23
Usp47Q8BY87 Gm8655-201ENSMUST00000221159 852 ntBASIC22.74■■□□□ 1.23
Usp47Q8BY87 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
Usp47Q8BY87 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Usp47Q8BY87 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Usp47Q8BY87 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Usp47Q8BY87 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC22.74■■□□□ 1.23
Usp47Q8BY87 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Usp47Q8BY87 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC22.73■■□□□ 1.23
Usp47Q8BY87 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Usp47Q8BY87 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Usp47Q8BY87 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC22.73■■□□□ 1.23
Usp47Q8BY87 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Usp47Q8BY87 Gm28265-201ENSMUST00000188201 2319 ntBASIC22.73■■□□□ 1.23
Usp47Q8BY87 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Usp47Q8BY87 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
Usp47Q8BY87 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Usp47Q8BY87 Gm6257-201ENSMUST00000163864 910 ntBASIC22.73■■□□□ 1.23
Usp47Q8BY87 Gm7230-201ENSMUST00000173026 815 ntBASIC22.73■■□□□ 1.23
Usp47Q8BY87 Mir5131-201ENSMUST00000175426 93 ntBASIC22.73■■□□□ 1.23
Usp47Q8BY87 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Usp47Q8BY87 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Usp47Q8BY87 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Usp47Q8BY87 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Usp47Q8BY87 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Usp47Q8BY87 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Usp47Q8BY87 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC22.72■■□□□ 1.23
Usp47Q8BY87 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Usp47Q8BY87 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
Usp47Q8BY87 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Usp47Q8BY87 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Usp47Q8BY87 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
Usp47Q8BY87 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC22.72■■□□□ 1.23
Usp47Q8BY87 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Usp47Q8BY87 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Usp47Q8BY87 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Usp47Q8BY87 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC22.72■■□□□ 1.23
Usp47Q8BY87 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Usp47Q8BY87 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC22.72■■□□□ 1.23
Usp47Q8BY87 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Usp47Q8BY87 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Usp47Q8BY87 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Usp47Q8BY87 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Usp47Q8BY87 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Usp47Q8BY87 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Usp47Q8BY87 Gm4609-201ENSMUST00000106443 1002 ntBASIC22.71■■□□□ 1.23
Usp47Q8BY87 Gm5138-201ENSMUST00000113842 1002 ntBASIC22.71■■□□□ 1.23
Usp47Q8BY87 Gm15191-201ENSMUST00000117933 1000 ntBASIC22.71■■□□□ 1.23
Usp47Q8BY87 Gm12182-201ENSMUST00000118655 1008 ntBASIC22.71■■□□□ 1.23
Usp47Q8BY87 Gm13882-201ENSMUST00000120886 1002 ntBASIC22.71■■□□□ 1.23
Usp47Q8BY87 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Usp47Q8BY87 Gm10284-201ENSMUST00000145057 1005 ntBASIC22.71■■□□□ 1.23
Usp47Q8BY87 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC22.71■■□□□ 1.23
Usp47Q8BY87 Gm10481-201ENSMUST00000179228 1002 ntBASIC22.71■■□□□ 1.23
Usp47Q8BY87 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC22.71■■□□□ 1.23
Usp47Q8BY87 Gm2574-201ENSMUST00000181051 1002 ntBASIC22.71■■□□□ 1.23
Usp47Q8BY87 Gm3200-201ENSMUST00000181493 1002 ntBASIC22.71■■□□□ 1.23
Usp47Q8BY87 Gm8825-201ENSMUST00000182565 998 ntBASIC22.71■■□□□ 1.23
Usp47Q8BY87 Gm4518-201ENSMUST00000182638 718 ntBASIC22.71■■□□□ 1.23
Usp47Q8BY87 Gm8330-201ENSMUST00000182754 1008 ntBASIC22.71■■□□□ 1.23
Usp47Q8BY87 Gm4575-201ENSMUST00000182991 1002 ntBASIC22.71■■□□□ 1.23
Usp47Q8BY87 Gm8709-201ENSMUST00000183230 1012 ntBASIC22.71■■□□□ 1.23
Usp47Q8BY87 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Usp47Q8BY87 Gm10293-201ENSMUST00000076317 1002 ntBASIC22.71■■□□□ 1.23
Usp47Q8BY87 Gm6316-201ENSMUST00000082064 1020 ntBASIC22.71■■□□□ 1.23
Usp47Q8BY87 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Usp47Q8BY87 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Usp47Q8BY87 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Usp47Q8BY87 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Usp47Q8BY87 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Usp47Q8BY87 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC22.71■■□□□ 1.23
Usp47Q8BY87 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Usp47Q8BY87 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Usp47Q8BY87 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC22.71■■□□□ 1.23
Usp47Q8BY87 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC22.71■■□□□ 1.23
Usp47Q8BY87 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Usp47Q8BY87 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Usp47Q8BY87 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
Usp47Q8BY87 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.23
Usp47Q8BY87 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
Usp47Q8BY87 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Usp47Q8BY87 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Usp47Q8BY87 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
Usp47Q8BY87 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Usp47Q8BY87 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
Usp47Q8BY87 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC22.7■■□□□ 1.22
Usp47Q8BY87 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC22.7■■□□□ 1.22
Usp47Q8BY87 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC22.7■■□□□ 1.22
Usp47Q8BY87 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC22.7■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms