Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Gm6623-201ENSMUST00000173570 544 ntBASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Ank2-226ENSMUST00000189368 339 ntBASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3dQ8BX13 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Mir770-201ENSMUST00000103252 94 ntBASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3dQ8BX13 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3dQ8BX13 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3dQ8BX13 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3dQ8BX13 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3dQ8BX13 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3dQ8BX13 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ube3dQ8BX13 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3dQ8BX13 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3dQ8BX13 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3dQ8BX13 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3dQ8BX13 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3dQ8BX13 Gm9103-201ENSMUST00000119371 405 ntBASIC14.34□□□□□ -0.11
Ube3dQ8BX13 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3dQ8BX13 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3dQ8BX13 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3dQ8BX13 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3dQ8BX13 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.34□□□□□ -0.11
Ube3dQ8BX13 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3dQ8BX13 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3dQ8BX13 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3dQ8BX13 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3dQ8BX13 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3dQ8BX13 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Ube3dQ8BX13 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ube3dQ8BX13 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms